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Subjects genes Remove constraint genes: genes Subjects strains Remove constraint strains: strains Year 2009 Remove constraint 2009: 2009
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1. A Draft Genome Sequence of Pseudomonas syringae pv. tomato T1 Reveals a Type III Effector Repertoire Significantly Divergent from That of Pseudomonas syringae pv. tomato DC3000

Description:
Includes references
Author:
Almeida, Nalvo F. , Yan, Shuangchun , Lindeberg, Magdalen , Studholme, David J. , Schneider, David J. , Condon, Bradford , Liu, Haijie , Viana, Carlos J. , Warren, Andrew , Evans, Clive , Kemen, Eric , MacLean, Dan , Angot, Aurelie , Martin, Gregory B. , Jones, Jonathan D. , Collmer, Alan , Setubal, Joao C.
Subject:
Solanum lycopersicum var. lycopersicum , tomatoes , Pseudomonas syringae pv. tomato , plant pathogenic bacteria , genome , nucleotide sequences , microbial genetics , Type III secretion system , strains , strain differences , host range , host-pathogen relationships , genomics , genes , translocation (plant physiology) , uptake mechanisms
Collection:
Journal Articles, USDA Authors, Peer-Reviewed
Year:
2009

2. An Australian environmental survey reveals moderate Spiroplasma biodiversity: characterization of four new serogroups and a continental variant

Description:
Includes references
Author:
Regassa, Laura B. , Murphy, April C. , Zarzuela, Alexander B. , Jandhyam, Haritha L. , Bostick, David S. , Bates, C. Ryan , Gasparich, Gail E. , Whitcomb, Robert F. , French, Frank E.
Subject:
Spiroplasma , strains , isolation , Tanacetum , cell biology , biodiversity , taxonomy , serotypes , strain differences , microbial physiology , ribosomal RNA , genes , nucleotide sequences , Australia
Collection:
Journal Articles, USDA Authors, Peer-Reviewed
Year:
2009

3. Comparison of Laboratory Colonies and Field Populations of Tamarixia radiata, an Ectoparasitoid of the Asian Citrus Psyllid, Using Internal Transcribed Spacer and Cytochrome Oxidase Subunit I DNA Sequences

Description:
Includes references
Author:
Barr, N.B. , Hall, D.G. , Weathersbee, A.A. III , Nguyen, R. , Stansly, P. , Qureshi, J.A. , Flores, D.
Subject:
insect pests , Diaphorina citri , plant pests , citrus fruits , greening disease , insect vectors , insect control , biological control , parasitoids , ectoparasites , Tamarixia , strains , genetic variation , insect genetics , genes , cytochrome-c oxidase , internal transcribed spacers , genetic markers , evolution , reproductive isolation , geographical variation , geographical distribution , biological control agents
Collection:
Journal Articles, USDA Authors, Peer-Reviewed
Year:
2009

4. Correlation between Genotypic Diversity, Lipooligosaccharide Gene Locus Class Variation, and Caco-2 Cell Invasion Potential of Campylobacter jejuni Isolates from Chicken Meat and Humans: Contribution to Virulotyping

Description:
Includes references
Author:
Habib, Ihab , Louwen, Rogier , Uyttendaele, Mieke , Houf, Kurt , Vandenberg, Olivier , Nieuwenhuis, Edward E. , Miller, William G. , van Belkum, Alex , De Zutter, Lieven
Subject:
Campylobacter jejuni , strains , isolation , chicken meat , food contamination , bacterial contamination , diarrhea , human diseases , campylobacteriosis , genetic variation , loci , lipooligosaccharides , genes , genotype , cell invasion , cell lines , intestinal mucosa
Collection:
Journal Articles, USDA Authors, Peer-Reviewed
Year:
2009

5. Genomic sequence analysis of the Illinois strain of the Agrotis ipsilon multiple nucleopolyhedrovirus

Description:
Includes references
Author:
Harrison, Robert L.
Subject:
Agrotis ipsilon multiple nucleopolyhedrovirus , genome , strains , open reading frames , nucleotide sequences , genes , phylogeny , infection , cell lines , Agrotis ipsilon , biological control agents , viral insecticides
Collection:
Journal Articles, USDA Authors, Peer-Reviewed
Year:
2009

6. Newcastle disease outbreaks in Kazakhstan and Kyrgyzstan during 1998, 2000, 2001, 2003, 2004, and 2005 were caused by viruses of the genotypes VIIb and VIId

Description:
Includes references
Author:
Bogoyavlenskiy, Andrey , Berezin, Vladimir , Prilipov, Alexey , Usachev, Eugeniy , Lyapina, Olga , Korotetskiy, Ilya , Zaitceva, Irina , Asanova, Saule , Kydyrmanov, Aydyn , Daulbaeva, Klara , Shakhvorostova, Larisa , Sayatov, Marat , King, Daniel
Subject:
chickens , Newcastle disease , Newcastle disease virus , disease outbreaks , strains , strain differences , genotype , nucleotide sequences , viral fusion proteins , genes , phylogeny , Kazakhstan , Kyrgyzstan
Collection:
Journal Articles, USDA Authors, Peer-Reviewed
Year:
2009

7. Performance Comparison of a fliCh7 Real-Time PCR Assay with an H7 Latex Agglutination Test for Confirmation of the H Type of Escherichia coli O157:H7

Description:
Includes references
Author:
Narang, Neelam , Fratamico, Pina M. , Tillman, Glenn , Pupedis, Kitty , Cray, William C. Jr.
Subject:
food pathogens , strains , pathotypes , Escherichia coli O157:H7 , microbial detection , bioassays , diagnostic techniques , polymerase chain reaction , genes , bacterial antigens , antigen detection , antigens , molecular epidemiology , pathogen identification , validity , accuracy , immunologic techniques , agglutination tests , food analysis , food safety
Collection:
Journal Articles, USDA Authors, Peer-Reviewed
Year:
2009

8. Sequence analysis, structure prediction, and functional validation of phaC1/phaC2 genes of Pseudomonas sp. LDC-25 and its importance in polyhydroxyalkanoate accumulation

Description:
Includes references
Author:
Sujatha, Kabilan , Mahalakshmi, Ayyasamy , Solaiman, Daniel K.Y. , Shenbagarathai, Rajaiah
Subject:
Pseudomonas , sequence analysis , genes , polyhydroxyalkanoates , bioaccumulation , prediction , protein structure , soil bacteria , strains , molecular cloning , conserved sequences , serine , alanine , protein folding , carboxylesterase , Fourier transform infrared spectroscopy , polymerase chain reaction
Collection:
Journal Articles, USDA Authors, Peer-Reviewed
Year:
2009

9. Sexual reproduction and recombination in the aflatoxin-producing fungus Aspergillus parasiticus

Description:
Includes references
Author:
Horn, Bruce W. , Ramirez-Prado, Jorge H. , Carbone, Ignazio
Subject:
Aspergillus parasiticus , sexual reproduction , genetic recombination , crossing , genes , strains , chromosomes , ascospores
Collection:
Journal Articles, USDA Authors, Peer-Reviewed
Year:
2009

10. Stress Tolerance and Environmental Fitness of Pseudomonas fluorescens A506, Which Has a Mutation in rpoS

Description:
Includes references
Author:
Hagen, Mary J. , Stockwell, Virginia O. , Whistler, Cheryl A. , Johnson, Kenneth B. , Loper, Joyce E.
Subject:
Pseudomonas fluorescens , stress tolerance , DNA-directed RNA polymerase , sigma factors , biological control agents , fruit crops , flowers , phyllosphere , aerial parts , Erwinia amylovora , blight , abiotic stress , strains , sequence analysis , epiphytes , mutagenesis , genes , bacterial diseases of plants , mutation
Collection:
Journal Articles, USDA Authors, Peer-Reviewed
Year:
2009