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Subjects genes Remove constraint genes: genes Subjects statistical analysis Remove constraint statistical analysis: statistical analysis

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1. A Large-Scale Screen for Artificial Selection in Maize Identifies Candidate Agronomic Loci for Domestication and Crop Improvement

Description:: Includes references
Author:: Yamasaki, Masanori , Tenaillon, Maud I. , Vroh Bi, Irie , Schroeder, Steve G. , Sanchez-Villeda, Hector , Doebley, John F. , Gaut, Brandon S. , McMullen, Michael D.
Subject:: selection criteria , corn , Zea mays , Zea mays subsp. parviglumis , domestication , American Indians , hybrids , inbred lines , genetic variation , genes , statistical analysis , sequence analysis , DNA , nutritive value , seed productivity , Mexico
Collection:: Journal Articles, USDA Authors, Peer-Reviewed
Year:: 2005

2. Estimation of viral richness from shotgun metagenomes using a frequency count approach

Author:: Heather K. Allen , John Bunge , James A. Foster , Darrell O. Bayles , Thaddeus B. Stanton
Subject:: bacteriophages , computer software , ecosystems , feces , freshwater , genes , metagenomics , nucleotide sequences , species diversity , statistical analysis , swine , water reuse
Collection:: Journal Articles, USDA Authors, Peer-Reviewed
Year:: 2013

3. Integrating comparative expression profiling data and association of SNPs with Salmonella shedding for improved food safety and porcine disease resistance

Description:: Includes references
Author:: Uthe, J.J. , Bearson, S.M.D. , Qu, L. , Dekkers, J.C. , Nettleton, D. , Rodriguez Torres, Y. , O'Connor, A.M. , McKean, J.D. , Tuggle, C.K.
Subject:: Salmonella , bacteria , crops , disease resistance , fertilizers , gene expression , gene frequency , genes , genetic improvement , genetic resistance , genetic variation , herds , hosts , loci , nitrogen content , on-farm food safety , pig manure , shedding , single nucleotide polymorphism , slaughterhouses , statistical analysis , streams , swine , swine diseases , water supply , waterways , United States
Collection:: Journal Articles, USDA Authors, Peer-Reviewed
Year:: 2011

4. Population structure in cultivated lettuce and its impact on association mapping

Description:: Includes references
Author:: Simko, I. , Hu, J.
Subject:: Lactuca sativa , lettuce , Lactuca saligna , Lactuca serriola , wild relatives , population genetics , population structure , chromosome mapping , genetic markers , linkage (genetics) , genes , cultivars , genetic polymorphism , loci , inheritance (genetics) , polygenic inheritance , genetic correlation , data analysis , statistical analysis
Collection:: Journal Articles, USDA Authors, Peer-Reviewed
Year:: 2008

5. Use of bioinformatic SNP predictions in differentially expressed genes to find SNPs associated with Salmonella colonization in swine

Description:: Includes references
Author:: Uthe, J.J. , Qu, L. , Couture, O. , Bearson, S.M.D. , O'Connor, A.M. , McKean, J.D. , Torres, Y.R. , Dekkers, J.C.M. , Nettleton, D. , Tuggle, C.K.
Subject:: Salmonella enterica subsp. enterica serovar Typhimurium , bacteria , blood , complementary DNA , disease resistance , expressed sequence tags , farms , fertilizers , gene expression , gene frequency , genes , genetic improvement , genotype , herds , nucleotide sequences , on-farm food safety , phenotype , phosphogluconate dehydrogenase , pork , prediction , produce , salmonellosis , sequence alignment , single nucleotide polymorphism , slaughterhouses , statistical analysis , surveys , swine , swine diseases , water pollution , United States
Collection:: Journal Articles, USDA Authors, Peer-Reviewed
Year:: 2011