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Subjects genes Remove constraint genes: genes Subjects phylogeny Remove constraint phylogeny: phylogeny Subjects sequence analysis Remove constraint sequence analysis: sequence analysis
Displaying items 1 - 10 of 19 start over

1. A molecular phylogeny for the leaf-roller moths (Lepidoptera: Tortricidae) and its implications for classification and life history evolution

Description:
Includes references
Author:
Regier, Jerome C. , Brown, John W. , Mitter, Charles , Baixeras, Joaquin , Cho, Soowon , Cummings, Michael P. , Zwick, Andreas
Subject:
Tortricidae , biological control agents , feeding behavior , genes , host plants , insect morphology , insect taxonomy , leafrollers , life history , models , molecular systematics , moths , nucleotide sequences , pests , phylogeny , plant-insect relations , provenance , sequence analysis , taxonomic revisions , tree yields , zoogeography
Collection:
Journal Articles, USDA Authors, Peer-Reviewed
Year:
2012

2. Analysis of host preference and geographical distribution of Anastrepha suspensa (Diptera: Tephritidae) using phylogenetic analyses of mitochondrial cytochrome oxidase I DNA sequence data

Description:
Includes references
Author:
Boykin, L.M. , Shatters, R.G. , Hall, D.G. , Burns, R.E. , Franqui, R.A.
Subject:
genes , cytochrome-c oxidase , Anastrepha suspensa , fruit flies , host plants , host preferences , geographical distribution , phylogeny , mitochondrial DNA , nucleotide sequences , sequence analysis , genetic variation , population genetics , Florida , Caribbean
Collection:
Journal Articles, USDA Authors, Peer-Reviewed
Year:
2006

3. Bacterial Tag-Encoded FLX Amplicon Pyrosequencing (bTEFAP) for Microbiome Studies: Bacterial Diversity in the Ileum of Newly Weaned Salmonella-Infected Pigs

Description:
Includes references
Author:
Dowd, Scot E. , Sun, Yan , Wolcott, Randy D. , Domingo, Alexander , Carroll, Jeffery A.
Subject:
piglets , weanlings , salmonellosis , bacterial infections , intestinal microorganisms , ileum , molecular epidemiology , microbial detection , rapid methods , new methods , virulence , genes , sequence analysis , numerical taxonomy , phylogeny , microbial genetics
Collection:
Journal Articles, USDA Authors, Peer-Reviewed
Year:
2008

4. Characterization of recent H5 subtype avian influenza viruses from US poultry

Description:
Includes references
Author:
Lee, C.W. , Senne, D. , Linares, J.A. , Woolcock, P.R. , Stallknecht, D.E. , Spackman, E. , Swayne, D.E. , Suarez, D.L.
Subject:
poultry , disease outbreaks , pathogen identification , disease diagnosis , disease incidence , nucleotide sequences , microbial genetics , sequence analysis , phylogeny , wild birds , disease reservoirs , genes , amino acid sequences , protein structure , disease surveillance , Influenza A virus , United States
Collection:
Journal Articles, USDA Authors, Peer-Reviewed
Year:
2004

5. Chloroplast genome sequence of the moss Tortula ruralis: gene content, polymorphism, and structural arrangement relative to other green plant chloroplast genomes

Description:
Includes references
Author:
Oliver, Melvin J. , Murdock, Andrew G. , Mishler, Brent D. , Kuehl, Jennifer V. , Boore, Jeffrey L. , Mandoli, Dina F. , Everett, Karin D.E. , Wolf, Paul G. , Duffy, Aaron M. , Karol, Kenneth G.
Subject:
Tortula , mosses and liverworts , chloroplast DNA , genomics , sequence analysis , genes , genetic polymorphism , species differences , phylogeny
Collection:
Journal Articles, USDA Authors, Peer-Reviewed
Year:
2010

6. Comparative genomic analysis of the Tribolium immune system

Description:
Includes references
Author:
Zou, Zhen , Evans, Jay D. , Lu, Zhiqiang , Zhao, Picheng , Williams, Michael , Sumathipala, Niranji , Hetru, Charles , Hultmark, Dan , Jiang, Haobo
Subject:
Tribolium (Coleoptera) , insect immunity , immune system , genome , genes , insect proteins , sequence analysis , sequence homology , genomics , species differences , phylogeny , evolution
Collection:
Journal Articles, USDA Authors, Peer-Reviewed
Year:
2007

7. Comparative genomics of mutualistic viruses of Glyptapanteles parasitic wasps

Description:
Includes references
Author:
Desjardins, Christopher A. , Gundersen-Rindal, Dawn E. , Hostetler, Jessica B. , Tallon, Luke J. , Fadrosh, Douglas W. , Fuester, Roger W. , Pedroni, Monica J. , Haas, Brian J. , Schatz, Michael C. , Jones, Kristine M. , Crabtree, Jonathan , Forberger, Heather , Nene, Vishvanath
Subject:
Glyptapanteles , parasitoids , insect viruses , Glyptapanteles indiensis bracovirus , Glyptapanteles flavicoxis bracovirus , endosymbionts , mutualism , proviruses , genes , nucleotide sequences , sequence analysis , transposons , phylogeny , genome , genomics
Collection:
Journal Articles, USDA Authors, Peer-Reviewed
Year:
2008

8. Genetic variation and virulence of Autographa californica multiple nucleopolyhedrovirus and Trichoplusia ni single nucleopolyhedrovirus isolates

Description:
Includes references
Author:
Harrison, Robert L. , Popham, Holly J.R. , Breitenbach, Jonathan E. , Rowley, Daniel L.
Subject:
Anagrapha falcifera , Autographa californica multiple nucleopolyhedrovirus , Autographa gamma , Galleria mellonella , Heliothis virescens , Plutella xylostella , Rachiplusia , Spodoptera , Trichoplusia ni , Trichoplusia ni single nucleopolyhedrovirus , bioassays , biological control agents , genes , genetic variation , hosts , insecticidal properties , nucleotide sequences , phylogeny , polymerase chain reaction , sequence analysis , virulence , viruses
Collection:
Journal Articles, USDA Authors, Peer-Reviewed
Year:
2012

9. Genomics of industrial Aspergilli and comparison with toxigenic relatives

Description:
In the special issue:'Meeting the challenges of toxic microorganisms and pathogens: implications of food safety and public health' edited by Shigeke Yamamoto and Kenneth A. Voss. Proceedings of the 10th UJNR International symposium held November 7-9, 2006, Maryland, United States.
Author:
Machida, Masayuki , Terabayashi, Yoshinobu , Sano, Motoaki , Yamane, Noriko , Tamano, Koichi , Payne, Gary A. , Yu, Jiujiang , Cleveland, Thomas E. , Nierman, William C.
Subject:
food industry , fermentation industry , food safety , starter cultures , Aspergillus oryzae , food biotechnology , toxigenic strains , Aspergillus flavus , Aspergillus niger , Aspergillus fumigatus , Aspergillus nidulellus , food pathogens , microbial genetics , genomics , sequence analysis , phylogeny , microarray technology , secondary metabolites , aspartic proteinases , genes , Japan
Collection:
Journal Articles, USDA Authors, Peer-Reviewed
Year:
2008

10. Mitochondrial phylogeography of vegetable pest Liriomyza sativae (Diptera: Agromyzidae): divergent clades and invasive populations

Description:
Includes references
Author:
Scheffer, S.J. , Lewis, M.L.
Subject:
genes , cytochrome-c oxidase , Liriomyza sativae , mitochondrial DNA , nucleotide sequences , sequence analysis , sequence homology , haplotypes , phylogeny , geographical distribution , invasive species , host plants , host range , leafminers
Collection:
Journal Articles, USDA Authors, Peer-Reviewed
Year:
2005