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1. Bovine enterovirus 2: complete genomic sequence and molecular modelling of a reference strain and a wild-type isolate from endemically infected US cattle

Description:
Includes references
Author:
Goens, S.D. , Botero, S. , Zemla, A. , Ecale Zhou, C. , Perdue, M.L.
Subject:
Bovine enterovirus , genome , nucleotide sequences , RNA , viral proteins , amino acid sequences , coat proteins , protein conformation , strain differences , viral diseases of animals and humans , cattle diseases , cattle , Maryland
Collection:
Journal Articles, USDA Authors, Peer-Reviewed
Year:
2004

2. Genome-wide identification of plant-upregulated genes of Erwinia chrysanthemi 3937 using a GFP-based IVET leaf array

Description:
Includes references
Author:
Yang, S. , Perna, N.T. , Cooksey, D.A. , Okinaka, Y. , Lindow, S.E. , Ibekwe, A.M. , Keen, N.T. , Yang, C.H.
Subject:
Pectobacterium chrysanthemi , plant pathogenic bacteria , bacterial proteins , gene expression regulation , pathogenicity , green fluorescent protein , genome , genomics , nucleotide sequences
Collection:
Journal Articles, USDA Authors, Peer-Reviewed
Year:
2004

3. Genomes of the Parapoxviruses Orf Virus and Bovine Papular Stomatitis Virus

Description:
Includes references
Author:
Delhon, G. , Tulman, E.R. , Afonso, C.L. , Lu, Z. , de la Concha-Bermejillo, A. , Lehmkuhl, H.D. , Piccone, M.E. , Kutish, G.F. , Rock, D.L.
Subject:
Orf virus , genome , DNA , nucleotide sequences , amino acid sequences , open reading frames , genes , viral proteins , genomics
Collection:
Journal Articles, USDA Authors, Peer-Reviewed
Year:
2004

4. Genomic characterization of virulent, attenuated, and revertant passages of a North American porcine reproductive and respiratory syndrome virus strain

Description:
Includes references
Author:
Grebennikova, T.V. , Clouser, D.F. , Vorwald, A.C. , Musienko, M.I. , Mengeling, W.L. , Lager, K.M. , Wesley, R.D. , Biketov, S.F. , Zaberezhny, A.D. , Aliper, T.I.
Subject:
Porcine reproductive and respiratory syndrome virus , virulence , genes , genome , nucleotide sequences , open reading frames , mutation , porcine reproductive and respiratory syndrome , swine
Collection:
Journal Articles, USDA Authors, Peer-Reviewed
Year:
2004

5. Genomic diversity of Erwinia carotovora subsp. carotovora and its correlation with virulence

Description:
Includes references
Author:
Yap, M.N. , Barak, J.D. , Charkowski, A.O.
Subject:
Pectobacterium carotovorum subsp. carotovorum , plant pathogenic bacteria , bacterial diseases of plants , Solanum tuberosum , potatoes , tubers , virulence , petioles , DNA , pulsed-field gel electrophoresis , operon , ribosomal RNA , restriction fragment length polymorphism , structural genes , nucleotide sequences , genetic variation , DNA profiling , genome , plasmids , physical chromosome mapping
Collection:
Journal Articles, USDA Authors, Peer-Reviewed
Year:
2004

6. Organization of repetitive DNAs and the genomic regions carrying ribosomal RNA, cob, and atp9 genes in the cucurbit mitochondrial genomes

Description:
Includes references
Author:
Bartoszewski, G. , Katzir, N. , Havey, M.J.
Subject:
Cucumis sativus , cucumbers , Cucurbita pepo , squashes , Citrullus lanatus , watermelons , Cucumis melo , melons , Cucumis , wild relatives , mitochondrial DNA , genome , repetitive sequences , ribosomal RNA , structural genes , cytochrome b , adenosinetriphosphatase , nucleotide sequences , transcription (genetics) , messenger RNA
Collection:
Journal Articles, USDA Authors, Peer-Reviewed
Year:
2004

7. The Genome of Canarypox Virus

Description:
Includes references
Author:
Tulman, E.R. , Afonso, C.L. , Lu, Z. , Zsak, L. , Kutish, G.F. , Rock, D.L.
Subject:
Canarypox virus , genome , genes , genetic recombination , nucleotide sequences , amino acid sequences , multigene family , viral proteins
Collection:
Journal Articles, USDA Authors, Peer-Reviewed
Year:
2004

8. Whole genome comparisons of serotype 4b and 1/2a strains of the food-borne pathogen Listeria monocytogenes reveal new insights into the core genome components of this species

Description:
Includes references
Author:
Nelson, K.E. , Fouts, D.E. , Mongodin, E.F. , Ravel, J. , DeBoy, R.T. , Kolonay, J.F. , Rasko, D.A. , Angiuoli, S.V. , Gill, S.R. , Paulsen, I.T. , Wonderling, L.D. , Uhlich, G.A. , Bayles, D.O. , Luchansky, J.B.
Subject:
Listeria monocytogenes , food pathogens , serotypes , genome , genomics , strains , cheeses , turkey meat , hot dogs , food contamination , microbial contamination , strain differences , genes , single nucleotide polymorphism , transposons , nucleotide sequences , mutation
Collection:
Journal Articles, USDA Authors, Peer-Reviewed
Year:
2004