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Subjects nucleotide sequences Remove constraint nucleotide sequences: nucleotide sequences Subjects Oryza sativa Remove constraint Oryza sativa: Oryza sativa
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1. A BAC-based physical map of Brachypodium distachyon and its comparative analysis with rice and wheat

Description:
Includes references
Author:
Gu, Yong Q. , Ma, Yaqin , Huo, Naxin , Vogel, John P. , You, Frank M. , Lazo, Gerard R. , Nelson, William M. , Soderlund, Carol , Dvorak, Jan , Anderson, Olin D. , Luo, Ming-Cheng
Subject:
Brachypodium distachyon , genome , physical chromosome mapping , bacterial artificial chromosomes , clones , DNA profiling , nucleotide sequences , sequence homology , Oryza sativa , rice , Triticum aestivum , wheat , species differences , gene duplication
Collection:
Journal Articles, USDA Authors, Peer-Reviewed
Year:
2009

2. A natural mutation in rc reverts white-rice-pericarp to red and results in a new, dominant, wild-type allele: Rc-g

Description:
Includes references
Author:
Brooks, Steven A. , Yan, Wengui , Jackson, Aaron K. , Deren, Christopher W.
Subject:
Oryza sativa , rice , loci , pigmentation , color , rice bran , alleles , pseudogenes , nucleotide sequences , mutation , red rice
Collection:
Journal Articles, USDA Authors, Peer-Reviewed
Year:
2008

3. Analysis of a single nucleotide polymorphism that controls the cooking quality of rice using a non-gel based assay

Description:
Includes references
Author:
Bormans, C.A. , Rhodes, R.B. , Kephart, D.D. , McClung, A.M. , Park, W.D.
Subject:
Oryza sativa , genetic polymorphism , nucleotide sequences , genetic variation , cooking quality , amylose , introns , hexosyltransferases , seed development , messenger RNA , DNA-directed DNA polymerase
Collection:
Journal Articles, USDA Authors, Peer-Reviewed
Year:
2002

4. Analysis of the structure of the AVR1-CO39 avirulence locus in virulent rice-infecting isolates of Magnaporthe grisea

Description:
Includes references
Author:
Farman, M.L. , Eto, Y. , Nakao, T. , Tosa, Y. , Nakayashiki, H. , Mayama, S. , Leong, S.A.
Subject:
infection , Oryza sativa , Magnaporthe grisea , loci , genes , cultivars , virulence , strains , retrotransposons , strain differences , amino acid sequences , nucleotide sequences , genomics , nucleic acid hybridization
Collection:
Journal Articles, USDA Authors, Peer-Reviewed
Year:
2002

5. Characterization of a Brome mosaic virus Strain and Its Use as a Vector for Gene Silencing in Monocotyledonous Hosts

Description:
Includes references
Author:
Ding, X.S. , Schneider, W.L. , Chaluvadi, S.R. , Rouf Mian, M.A. , Nelson, R.S.
Subject:
Hordeum vulgare , barley , Oryza sativa , rice , Zea mays , corn , Brome mosaic virus , genetic vectors , gene silencing , genes , nucleotide sequences , complementary DNA , leaves , phenotype , messenger RNA , gene expression , pathogenicity , microbial genetics , experimental design
Collection:
Journal Articles, USDA Authors, Peer-Reviewed
Year:
2006

6. Comparative expression analysis of two sugarcane polyubiquitin promoters and flanking sequences in transgenic plants

Description:
Includes references
Author:
Wei, Hairong , Wang, Ming-Li , Moore, Paul H. , Albert, Henrik H.
Subject:
Saccharum officinarum , sugarcane , transgenic plants , Oryza sativa , rice , plant proteins , ubiquitin , promoter regions , beta-glucuronidase , reporter genes , gene expression , gene silencing , heat stress , nucleotide sequences
Collection:
Journal Articles, USDA Authors, Peer-Reviewed
Year:
2003

7. Comparative Transcriptional Profiling of Two Contrasting Rice Genotypes under Salinity Stress during the Vegetative Growth Stage

Description:
Includes references
Author:
Walia, Harkamal , Wilson, Clyde , Condamine, Pascal , Liu, Xuan , Ismail, Abdelbagi M. , Zeng, Linghe , Wanamaker, Steve I. , Mandal, Jayati , Xu, Jin , Cui, Xinping , Close, Timothy J.
Subject:
Oryza sativa , rice , genetic variation , genotype , vegetative growth , salt tolerance , genome , transcription (genetics) , gene expression regulation , plant genetics , salt stress , phenotypic variation , flavonoids , plant physiology , plant biochemistry , nucleotide sequences
Collection:
Journal Articles, USDA Authors, Peer-Reviewed
Year:
2005

8. Construction, alignment and analysis of twelve framework physical maps that represent the ten genome types of the genus Oryza

Description:
Includes references
Author:
Kim, HyeRan , Hurwitz, Bonnie , Yu, Yeisoo , Collura, Kristi , Gill, Navdeep , SanMiguel, Phillip , Mullikin, James C. , Maher, Christopher , Nelson, William , Wissotski, Marina , Braidotti, Michele , Kudrna, David , Goicoechea, José Luis , Stein, Lincoln , Ware, Doreen , Jackson, Scott A. , Soderlund, Carol , Wing, Rod A.
Subject:
Oryza , genome , physical chromosome mapping , bacterial artificial chromosomes , DNA profiling , nucleotide sequences , sequence analysis , sequence alignment , Oryza sativa , transposons , microsatellite repeats , antisense RNA , single nucleotide polymorphism
Collection:
Journal Articles, USDA Authors, Peer-Reviewed
Year:
2008

9. Detection of Acidovorax avenae ssp. avenae in rice seeds using BIO-PCR

Description:
Includes references
Author:
Song, W.Y. , Kim, H.M. , Hwang, C.Y. , Schaad, N.W.
Subject:
Oryza sativa , rice , seeds , Acidovorax avenae subsp. avenae , plant pathogenic bacteria , polymerase chain reaction , bacterial diseases of plants , disease detection , pathogen identification , DNA primers , Southern blotting , nucleotide sequences
Collection:
Journal Articles, USDA Authors, Peer-Reviewed
Year:
2004

10. Development of dominant rice blast Pi-ta resistance gene markers

Description:
Includes references
Author:
Jia, Y. , Wang, Z. , Singh, P.
Subject:
Oryza sativa , Magnaporthe grisea , disease resistance , genetic resistance , genetic markers , introgression , cultivars , polymerase chain reaction , nucleotide sequences , amino acid sequences
Collection:
Journal Articles, USDA Authors, Peer-Reviewed
Year:
2002